Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927837.1_cds_XP_016475538.1_67459
CDS Infomation

[gene=LOC107797189] [db_xref=GeneID:107797189] [protein=ATPase family AAA domain-containing protein 3-A-like] [protein_id=XP_016475538.1] [location=complement(join(69918..70428,71147..71295,71655..71988,72798..72888,73551..73860,73943..74053,74767..74862,75127..75453))] [gbkey=CDS]
Sequence

ATGGGAAAAACATATGCAGCAGGGCTATTTGCAGCCCTAGCTTCTGCTAAGTTTGGTACA
GAAACTGCTTATGCCGACGGTGGTGGTGGTGGTGGTGGTGGTGGTTTTAGCTTCTCTCCG
TTTTCCACCTCTTCTAATAAGGTACCGAGTGCTCCTGCTGATGTTCCTCAGCCACCTCCG
GCGGCAACGGCAACGGCAACTCCTGAGCCTCCTCCTAAGGTTCGAAATGATAATCCGAGG
ACTACTTCAGCTGGTTTTGATCCTGAGGCTTTGGAGAGAGGGGCTAAGGCTTTGAGAGAG
ATTAATAGTTCTAAAAGTGCCAAACAGGTTTTTGAAGTGATTAAAAAGCAAGAAGACACA
AGGCAGGTAGAGTTAACTGCAAAAATGCAAGAGTTTAAAGCACTGCAAGCTCAAGCTGAG
ACGGAGAGACAAAGGGTTATATACGACGAACAAAAAAAACTAGCTCAGCAACAGGCACAA
ATCAAGTCACAGATGGCTCGATATGAAGATGAATTAGCAAGGAAAAGGATGCAGGCAGAA
AATGAGCACCATAGAGCTAGAAATCAGGAGTTGGTAAAAATGCAAGAGGATTCAGCTCTG
AGACAAGAGGCAGCTAGACGAGCAACAGAAGAACAAATCCAAGCGCAGCGCCGCCAGACA
GAGAGAGAAAAAGCAGAGATCGAGCGTGAAACTATTAGAGTGAGAGCTATGGCAGAAGCA
GAGGGGAGAGCACATGAAGCAAAGCTGGCTGAGGATGTTAACAGGAGAATACTAGTAGAC
CGTGCAAATGCTGAACGGGAGAAATGGGTCGCTGCGATTAACACAACTTTTGATCATATT
GGAGGTGGTTTCCGTGCAATACTAACGGATCAAAATAAGCTTGTTGTGGCTGTTGGTGGC
GTGACTGCTCTTGCAGCTGGAATATATACAACAAGAGAAGGTGCAAGAGTTGTCTGGAGT
TATGTGGACAGAATATTGGGACAGCCATCATTGATCAGAGAGTCATCTAGGGGCAAATAT
CCTTGGTCAGGGTTCTTCCCACGAGCCATGAGCACTCTCTCGAAGGGTGCTAATGGAGGT
TCTGCAACCAAGTCTGGGAAAGGGTTCGGGGATGTTATTCTACATCCATCTCTTGAAAAA
AGGATTCAGCAGTTAGCCAATGCAACTGCTAATACCAAATCCCATCAAGCTCCATTTCGC
AACATGCTCTTTTATGGCCCTCCAGGAACAGGGAAGACAATGGTTGCTAGAGAGCTTGCT
CGCAGATCTGGACTTGACTATGCATTGATGACGGGTGGTGATGTTGCGCCACTGGGATCA
CAGGCTGTCACTAAAATACATCAGTTATTTGATTGGTCCAAAAAATCCAGAAAGGGTCTA
TTACTTTTTATTGACGAAGCAGATGCATTTTTGTGCGAGCGAAACAAAACCTATATGAGT
GAAGCTCAGAGGAGTGCCCTCAATGCACTCCTTTTCCGCACCGGTGATCAGTCAAAAGAT
ATAGTACTTGCCTTAGCTACAAATCGCCCTGGTGATCTTGATTCAGCTATTGCAGACCGT
ATTGATGAAGTCATCGAATTCCCTTTGCCTGGTGAAAGCGAGCGCTTCAAGCTGATCAAA
CTGTATCTGGAAAGATATATAGCTCAAGCTGGGGAAAGGAAACCTGGTTTCTTTTCAAGC
TTATTCAAGAAGCAGCAGCAGAAAATAGAGATAAAAGGATTGACGGATGATATTCTGAGA
GAAGCAGCTGCCAGGACGGGGGGATTTTCAGGCAGAGAGATTGCAAAACTGATGGCTAGT
GTTCAAGCTGCTGTATATGGGAGCGAGGACTGTGTATTAGACCCTAACTTATTTCGTGAA
GTGGTAGATTATAAAGTTGCTGAACATCAGCAGAGGAGGAAATTAGCAGCAGCTGAGGGT
GACAAGTGA

Peptide Sequence

PEP ID

XP_016475538.1
PEP Infomation

PREDICTED: ATPase family AAA domain-containing protein 3-A-like [Nicotiana tabacum]
Sequence

MGKTYAAGLFAALASAKFGTETAYADGGGGGGGGGFSFSPFSTSSNKVPSAPADVPQPPP
AATATATPEPPPKVRNDNPRTTSAGFDPEALERGAKALREINSSKSAKQVFEVIKKQEDT
RQVELTAKMQEFKALQAQAETERQRVIYDEQKKLAQQQAQIKSQMARYEDELARKRMQAE
NEHHRARNQELVKMQEDSALRQEAARRATEEQIQAQRRQTEREKAEIERETIRVRAMAEA
EGRAHEAKLAEDVNRRILVDRANAEREKWVAAINTTFDHIGGGFRAILTDQNKLVVAVGG
VTALAAGIYTTREGARVVWSYVDRILGQPSLIRESSRGKYPWSGFFPRAMSTLSKGANGG
SATKSGKGFGDVILHPSLEKRIQQLANATANTKSHQAPFRNMLFYGPPGTGKTMVARELA
RRSGLDYALMTGGDVAPLGSQAVTKIHQLFDWSKKSRKGLLLFIDEADAFLCERNKTYMS
EAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAIADRIDEVIEFPLPGESERFKLIK
LYLERYIAQAGERKPGFFSSLFKKQQQKIEIKGLTDDILREAAARTGGFSGREIAKLMAS
VQAAVYGSEDCVLDPNLFREVVDYKVAEHQQRRKLAAAEGDK

Transcript Sequence

Gene sequence data has not been registered.